http://www.elekta.com/healthcare_international_elekta_neuromag_centers_us.php
UNITED STATES
Massachusetts General Hospital
MGH-NMR Center,
Dept. of Radiology,
Building 149, 13th Street,
Charlestown, Massachusetts
MA 02129-2060
Phone: +1 617 448 3641
Fax: +1 617 726 7422
Email: msh@nmr.mgh.harvard.edu
Contact: Dr. Matti Hämäläinen
Incorrect details? Click here to let us know.
UCSD Medical Center
402 Dickinson Street,
Suite 454,
San Diego, California
CA 92103
Contact: Mingxiong Huang, Ph.D.
Email: mxhuang@ucsd.edu
Contact: Roland Lee, MD
Email: rrlee@ucsd.edu
Phone: +1 858-534-1254
Fax: +1 858-534-6046
Incorrect details? Click here to let us know.
University of Pittsburgh Medical Center
Center for Advanced Brain Magnetic Source Imaging (CABMSI),
200 Lothrop Street,
Pittsburgh, Pennsylvania
PA 15213-2582
Contact: Ajay Niranjan, MD, MBA
Phone: +1 (412) 647-9699
Fax: +1 412-692-4636
Email: niranjana@upmc.edu
Incorrect details? Click here to let us know.
Alexian Brothers Hospital Network
Alexian Brothers Neuroscience Institute,
800 Biesterfield Road ,
Eberle 610,
Elk Grove Village,
Chicago, Illinois
IL 60007
Contact: John Ebersole, M.D.
Email: jebersol@neurology.bsd.uchicago.edu
Phone: +1 (847) 981 3688
Incorrect details? Click here to let us know.
Cleveland Clinic Foundation
Department of Neurology,
9500 Euclid Ave,
Cleveland, Ohio
OH 44195
Contact: Dr. Richard Burgess, M.D., Ph.D.
Phone: +1 216 444 2200
Email: rcb@eeg.ccf.org
Web: http://www.ccf.org
Incorrect details? Click here to let us know.
The Nebraska Medical Center MEG Center
The Nebraska Medical Center,
988422 Nebraska Medical Center,
Omaha, Nebraska
NE 68198-8422
Contact: Ken Maurer, Manager
Phone: 4025526444
Email: kmaurer@nebraskamed.com
Contact: Tony Wilson, PhD
Phone: 4025526431
Web: http://www.nebraskamed.com
Incorrect details? Click here to let us know.
Medical College of Wisconsin / Froedtert Hospital
Department of Neurology,
9200 West Wisconsin Ave,
Milwaukee, Wisconsin
WI 53226-3596
Phone: 414 805 1174
Web: http://www.mcw.edu/neurology/faculty/SylvainBaillet.htm
Contact: Scientific Director: Sylvain Baillet, PhD
Email: sbaillet@mcw.edu
Contact: Program Manager: Kaitlin Swanson
Incorrect details? Click here to let us know.
Children's Hospital of Philadelphia (CHOP)
34th Street and Civic Center Boulevard,
Philadelphia , Pennsylvania
PA 19104
Contact: Timothy Roberts, PhD
Phone: (267) 426 0384
Fax: (215) 590 1345
Email: robertstim@email.chop.edu
Web: http://www.chop.edu/
Incorrect details? Click here to let us know.
MIND Research Network
The Mind Research Network,
1101 Yale Blvd. NE,
Albuquerque, New Mexico
87106
Contact: Julia M. Stephen, PhD
Email: jstephen@mrn.org
Phone: (505) 272-0280
Fax: (505) 272-8002
Incorrect details? Click here to let us know.
University of Washington
Institute for Learning and Brain Sciences,
Fisheries Center Building,
University of Washington,
Seattle, Washington
98195-7988
Contact: Patricia Kuhl, Ph.D.
Email: ilabs@u.washington.edu
Phone: 206-543-6000
Fax: 206-221-6472
Incorrect details? Click here to let us know.
National Intrepid Center of Excellence (NICoE)
8901 Wisconsin Avenue,
Building #12,
Bethesda, Maryland
20814
Contact: Gerard Riedy, MD, PhD
Web: http://www.fallenheroesfund.org/national-intrepid-center-of-excellence.aspx
Incorrect details? Click here to let us know.
McGovern Institute for Brain Research
MIT 46-3160,
Cambridge, Massachusetts
MA 02139
Contact: Charles Jennings, Ph.D
Email: charlesj@mit.edu
Phone: +1 617 324 0639
Contact: Dimitrios Pantazis, Ph.D.
Email: pantazis@mit.edu
Phone: +1 617 715 4330
Web: http://mcgovern.mit.edu/
Incorrect details? Click here to let us know.
University of Utah Magnetic Source Imaging (UUMSI)
at the University of Utah,
729 Arapeen Drive,
Salt Lake City, UTAH
84108
Contact: Michael Funke, MD., Ph.D.
Phone: (801) 585-6840
Fax: (801) 585-5240
Email: michael.funke@hsc.utah.edu
Incorrect details? Click here to let us know.
Sunday, August 28, 2011
Haven't updated for a while.
Always want to install debian because of the NeuroDebian (http://neuro.debian.net/#how-to-use-this-repository). Finally, I bought a 2 TB hard disk ($72 dollars) from Amazon.com last week and installed it in my home desktop. Then, I installed debian OS in the new 2 TB hard disk. My old Fedora can still be booted from the other hard disk.
The installation of debian OS was quite easy. My motherboard's CMOS battery had problem. It caused me a little trouble. The debian system installation was very smooth. I downloaded the smaller CD version ISO image since I would have internet support during the installation process. I burend iso image to a writable CD. Then, I booted my desktop with this burned CD. It brought me right into the debian installation window. The rest was like all other system installation. I just simply followed the step by step instructions. Bingo! I got my debian system installed successfully.
So far, I like the way it works. Still a lot of work to do though ... I need to install all the other software packages (FSL, AFNI, CTF MEG, MATLAT, ...etc). More work ...
Ha Ha
All right, post some nice group pictures.
The installation of debian OS was quite easy. My motherboard's CMOS battery had problem. It caused me a little trouble. The debian system installation was very smooth. I downloaded the smaller CD version ISO image since I would have internet support during the installation process. I burend iso image to a writable CD. Then, I booted my desktop with this burned CD. It brought me right into the debian installation window. The rest was like all other system installation. I just simply followed the step by step instructions. Bingo! I got my debian system installed successfully.
So far, I like the way it works. Still a lot of work to do though ... I need to install all the other software packages (FSL, AFNI, CTF MEG, MATLAT, ...etc). More work ...
Ha Ha
All right, post some nice group pictures.
Dr. Holland's super girls' team (Hope Ben will not see this comment) *_*
Friday, March 18, 2011
MEG: shall I love you? Rich data plus various ways to analyze. What's the best? Or establish my own.
Parametric methods
* Dipole Fitting
* Multiple Dipole Fitting
* Extended Patch Fitting (To correctly model surface extent of current distribution)
Scanning methods
* MUSIC--MUltiple SIgnal Classification
* RAP MUSIC--Recursively Applied (RAP) MUSIC
* LCMV--Linear Constrained Minimum Variance
* SAM -- non-linear adaptive spatial filter (use time domain sensor covariance)
* Vector beamformer
* DICS -- use cross-spectral density covariance
Imaging methods
L1 Norm
* MCE - Minimum Current Estimate
L2 Norm
* MNE - Minimum Norm Estimate
o Software:MNE-Suite
* LORETA - Low Resolution Brain Electromagnetic Tomography
o Probably everything you ever wanted to know is at this website by Pascual-Marqui
* LAURA
* dSPM - dynamic Statistical Parametric Mapping
Bayesian Approaches
* sLORETA - standardized Low Resolution Brain Electromagnetic Tomography
o Open PDF file with all technical details
o Download the free academic sLORETA software
Something New
* eLORETA - exact Low Resolution Brain Electromagnetic Tomography
o Technical report (abstract & PDF file) at arXiv
o Web pages with full technical report
o Some eLORETA results
* Dipole Fitting
* Multiple Dipole Fitting
* Extended Patch Fitting (To correctly model surface extent of current distribution)
Scanning methods
* MUSIC--MUltiple SIgnal Classification
* RAP MUSIC--Recursively Applied (RAP) MUSIC
* LCMV--Linear Constrained Minimum Variance
* SAM -- non-linear adaptive spatial filter (use time domain sensor covariance)
* Vector beamformer
* DICS -- use cross-spectral density covariance
Imaging methods
L1 Norm
* MCE - Minimum Current Estimate
L2 Norm
* MNE - Minimum Norm Estimate
o Software:MNE-Suite
* LORETA - Low Resolution Brain Electromagnetic Tomography
o Probably everything you ever wanted to know is at this website by Pascual-Marqui
* LAURA
* dSPM - dynamic Statistical Parametric Mapping
Bayesian Approaches
* sLORETA - standardized Low Resolution Brain Electromagnetic Tomography
o Open PDF file with all technical details
o Download the free academic sLORETA software
Something New
* eLORETA - exact Low Resolution Brain Electromagnetic Tomography
o Technical report (abstract & PDF file) at arXiv
o Web pages with full technical report
o Some eLORETA results
FW:: MNE2.7 installation - try to install MNE
MNE2.7 installation
t@ubuntu:~$ /media/e/mne2.7/bin/mne_opengl_test
mne_opengl_test version 1.1 compiled at Dec 11 2009 05:32:58
Environment variable MNE_ROOT not set
t@ubuntu:~$ /media/e/mne2.7/bin/mne_setup.sh
bash: /media/e/mne2.7/bin/mne_setup.sh: No such file or directory
t@ubuntu:~$ /media/e/mne2.7/bin/mne_setup_sh
ERROR: The environment variable MNE_ROOT is not defined!
t@ubuntu:~$ echo $SHELL
/bin/bash
t@ubuntu:~$ export MNE_ROOT=/media/e/mne2.7/
t@ubuntu:~$ . $MNE_ROOT/bin/mne_setup_sh
Attention:
The mne setup command is
>.
not> MNE_ROOT/bin/mne_setup_sh
the dot
MNE software location set to:
MATLAB software not available
/media/e/mne2.7//bin added to PATH
/media/e/mne2.7//lib added to LD_LIBRARY_PATH
/media/e/mne2.7//share/app-defaults/%N added to XUSERFILESEARCHPATH
Note: Remember to set SUBJECTS_DIR and SUBJECT environment variables correctly.
Note: FreeSurfer environment is needed to access tkmedit from mne_analyze.
t@ubuntu:~$ /media/e/mne2.7/bin/mne_opengl_test
mne_opengl_test version 1.1 compiled at Dec 11 2009 05:32:58
nvert = 140970
ntri = 281936
GLUT_WINDOW_BUFFER_SIZE 24
GLUT_WINDOW_RED_SIZE 8
GLUT_WINDOW_GREEN_SIZE 8
GLUT_WINDOW_BLUE_SIZE 8
GLUT_WINDOW_DEPTH_SIZE 24
GLUT_WINDOW_ALPHA_SIZE 0
500 x 500
27279.327 msecs spent per rotation
28335.110 msecs spent per rotation
24754.223 msecs spent per rotation
24536.961 msecs spent per rotation
24795.956 msecs spent per rotation
24608.255 msecs spent per rotation
24815.126 msecs spent per rotation
^C
t@ubuntu:~$
export SUBJECTS_DIR=/media/e/sample_data/subjects/
export SUBJECTS=sample
mne_opengl_test version 1.1 compiled at Dec 11 2009 05:32:58
Environment variable MNE_ROOT not set
t@ubuntu:~$ /media/e/mne2.7/bin/mne_setup.sh
bash: /media/e/mne2.7/bin/mne_setup.sh: No such file or directory
t@ubuntu:~$ /media/e/mne2.7/bin/mne_setup_sh
ERROR: The environment variable MNE_ROOT is not defined!
t@ubuntu:~$ echo $SHELL
/bin/bash
t@ubuntu:~$ export MNE_ROOT=/media/e/mne2.7/
t@ubuntu:~$ . $MNE_ROOT/bin/mne_setup_sh
Attention:
The mne setup command is
>.
not> MNE_ROOT/bin/mne_setup_sh
the dot
MNE software location set to:
MATLAB software not available
/media/e/mne2.7//bin added to PATH
/media/e/mne2.7//lib added to LD_LIBRARY_PATH
/media/e/mne2.7//share/app-defaults/%N added to XUSERFILESEARCHPATH
Note: Remember to set SUBJECTS_DIR and SUBJECT environment variables correctly.
Note: FreeSurfer environment is needed to access tkmedit from mne_analyze.
t@ubuntu:~$ /media/e/mne2.7/bin/mne_opengl_test
mne_opengl_test version 1.1 compiled at Dec 11 2009 05:32:58
nvert = 140970
ntri = 281936
GLUT_WINDOW_BUFFER_SIZE 24
GLUT_WINDOW_RED_SIZE 8
GLUT_WINDOW_GREEN_SIZE 8
GLUT_WINDOW_BLUE_SIZE 8
GLUT_WINDOW_DEPTH_SIZE 24
GLUT_WINDOW_ALPHA_SIZE 0
500 x 500
27279.327 msecs spent per rotation
28335.110 msecs spent per rotation
24754.223 msecs spent per rotation
24536.961 msecs spent per rotation
24795.956 msecs spent per rotation
24608.255 msecs spent per rotation
24815.126 msecs spent per rotation
^C
t@ubuntu:~$
export SUBJECTS_DIR=/media/e/sample_data/subjects/
export SUBJECTS=sample
Thursday, February 17, 2011
My AC adaptor of the D-Link DI-624 router broken this week!
I decided to upgrade my wireless router. I ordered D-LINK DIR-655 from Amazon.com (80 bucks - I'm an Amazon website fan - I watched that company stock went up from 65 dollars/share to 183 dollars/share).
Get back to the real issue here. Tonight I can not get my Fedora to connect to the new wireless router.
I accidentally un-installed all the wireless-tools. Even command line iwconfig did not work. I got into trouble. I went to my windows PC and downloaded wireless-tools-29-5.1.fc12.x86_64.rpm and wpa_supplicant-0.7.3.tar.gz. Then, I transferred them to my Fedora computer through external hard disk since the internet and intranet did not work and my wireless router is on the first floor. I was not planning to unplug my Fedora and carry that big guy to the first floor. Anyway, it worked fine. The rpm did not have Public Key. I changed /etc/yum.conf and set gbgcheck=0.
#sudo yum localinstall wireless-tools-29-5.1.fc12.x86_64.rpm
worked magically.
For wpa_supplicant-0.7.3.tar.gz, it contains source code. I extracted it and went into the src folder.
#make
#sudo make install
You can use wpa_gui or command line.
See http://hostap.epitest.fi/wpa_supplicant/wpa_gui.html
I did not use the gui of wpa. I opened Network Connections and build the new wireless.
#ifconfig
The system worked.
Use wpa software: http://www.linuxforums.org/forum/red-hat-fedora-linux/99133-setting-up-wpa-wireless-connection.html
1)
#gedit /etc/wpa_supplicant/wpa_supplicant.conf
Ctrl_interface = /var/run /wpa_supplicant
Ctrl_interface_group = wheel
Network = (
Ssid = "YOUR_NAME_SSID"
Key_mgmt # = "WPA-PSK"
Psk = "YOURPASS_OR_KEY"
)
2) make association
# wpa_supplicant -B -dd -iwlan0 -c /etc/wpa_supplicant/wpa_supplicant.conf
wait a few seconds ...
3) #dhclient wlan0
This experience:
Commands:
#ifconfig wlan1 up
#iwlist wlan1 scan
#iwconfig wlan1 essid yournet
#iwconfig wlan1 key yourkeyinHex
#iwconfig
List the routes:
#netstat -r
Command line connect wireless:
#sudo iwconfig
#iwconfig wlan1 essid mynet key mykeyinHEX
#ifconfig wlan1 up
#dhclient wlan1
#iwconfig wlan1
Hope those will be helpful for someone who has the same problem as I do.
Get back to the real issue here. Tonight I can not get my Fedora to connect to the new wireless router.
I accidentally un-installed all the wireless-tools. Even command line iwconfig did not work. I got into trouble. I went to my windows PC and downloaded wireless-tools-29-5.1.fc12.x86_64.rpm and wpa_supplicant-0.7.3.tar.gz. Then, I transferred them to my Fedora computer through external hard disk since the internet and intranet did not work and my wireless router is on the first floor. I was not planning to unplug my Fedora and carry that big guy to the first floor. Anyway, it worked fine. The rpm did not have Public Key. I changed /etc/yum.conf and set gbgcheck=0.
#sudo yum localinstall wireless-tools-29-5.1.fc12.x86_64.rpm
worked magically.
For wpa_supplicant-0.7.3.tar.gz, it contains source code. I extracted it and went into the src folder.
#make
#sudo make install
You can use wpa_gui or command line.
See http://hostap.epitest.fi/wpa_supplicant/wpa_gui.html
I did not use the gui of wpa. I opened Network Connections and build the new wireless.
#ifconfig
The system worked.
Use wpa software: http://www.linuxforums.org/forum/red-hat-fedora-linux/99133-setting-up-wpa-wireless-connection.html
1)
#gedit /etc/wpa_supplicant/wpa_supplicant.conf
Ctrl_interface = /var/run /wpa_supplicant
Ctrl_interface_group = wheel
Network = (
Ssid = "YOUR_NAME_SSID"
Key_mgmt # = "WPA-PSK"
Psk = "YOURPASS_OR_KEY"
)
2) make association
# wpa_supplicant -B -dd -iwlan0 -c /etc/wpa_supplicant/wpa_supplicant.conf
wait a few seconds ...
3) #dhclient wlan0
This experience:
Commands:
#ifconfig wlan1 up
#iwlist wlan1 scan
#iwconfig wlan1 essid yournet
#iwconfig wlan1 key yourkeyinHex
#iwconfig
List the routes:
#netstat -r
Command line connect wireless:
#sudo iwconfig
#iwconfig wlan1 essid mynet key mykeyinHEX
#ifconfig wlan1 up
#dhclient wlan1
#iwconfig wlan1
Hope those will be helpful for someone who has the same problem as I do.
Saturday, January 8, 2011
Albert Einstein's Quotes
Everything should be made as simple as possible, but not simpler.
E = M C2
Anyone who has never made a mistake has never tried anything new.
Science without religion is lame, religion without science is blind.
E = M C2
Anyone who has never made a mistake has never tried anything new.
Science without religion is lame, religion without science is blind.
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